CDS

Accession Number TCMCG042C44733
gbkey CDS
Protein Id XP_016476869.1
Location join(17924..17977,18074..18136,19658..19767,20249..20349,21252..21313,21442..21582,24844..24972,25259..25305,25824..25887,27180..27300,27424..27466,27547..27615,27836..27905,29464..29604,29894..29958,30300..30396,31091..31150,31537..31689,31853..31919,32003..32104,32541..32696,33546..33734,34030..34208)
Gene LOC107798403
GeneID 107798403
Organism Nicotiana tabacum

Protein

Length 760aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016621383.1
Definition PREDICTED: cleavage stimulation factor subunit 77-like isoform X1 [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category A
Description Tetratricopeptide repeat
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
KEGG_ko ko:K14408        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03015        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
GOs GO:0000375        [VIEW IN EMBL-EBI]
GO:0000377        [VIEW IN EMBL-EBI]
GO:0000398        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006353        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006369        [VIEW IN EMBL-EBI]
GO:0006378        [VIEW IN EMBL-EBI]
GO:0006379        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006397        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016071        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031123        [VIEW IN EMBL-EBI]
GO:0031124        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042868        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043631        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045892        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060968        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1902679        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:1903507        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGACGGAAAAGTATAATGTTGAAGCTGCAGAAATTCTTGCTAACGAGGCACTGCGCTTGCCAATTTCAGAAGCAGTGCCGATATATGAGCAACTTCTGTCCACGTTTCCCACTGCGGCAAAATACTGGAAGCAATATGTCGAGGCACACATGACGGTAAATAATGATGATGCAACAAAGCAAATATTTAGTCGCTGCCTCTTGAACTGTCTACAGATTCCTCTTTGGCGCTGTTACATCCGCTTTATCCGGAAAGTCAATGACAAGAGGGGGAATGAGGGTCAAGAAGAGACAAGAAAGGCTTTTGATTTCATGCTTAACTATGTTGGAGCAGACATTGCATCTGGTCCAGTGTGGATGGAATACATTGCATTTTTAAGGTCTTCGCCTGCTCAAACCACGCAAGAAGAATCACAACGAATGACCTCTGTGAGGAAAGCATACCAAAGAGCTATTGTTACCCCAACCCATCACGTGGAACAGCTTTGGAGGGACTATGAGAATTTTGAAAATTCAATTAGTCGAGCCTTGGCAAAAGGGCTGGTGTCTGAATACCAACCAAAATATAACAGTGCGAGGGCTGTATACAGAGAAAGGAAGAAGTACATTGATGAAATTGATTGGAATATGCTAGCGATTCCACCTTCCGGCACTTCCAAGGAGGAAATGCAATGGATGGCATGGAAAAGACTTCTAGCATTTGAGAAAGCAAACCCTCAGAGGATAGACAGTGCTTCTGCTAATAAAAGAATTGTGTTCACATATGAGCAGTGCCTCATGCATTTGTATCATTATCCTGACATATGGTATGAATATGCCACATGGCATGCAAAAGCTGGTTCAATAGACTCTGCTATCAAGGTTTTCCAGCGAGCTCTTAAAGCTCTTCCTGATATGGTTATGCTGAACTTGAGGAATCACGTGGAGCCATTCAGGCTGCTAAAAAAGTATATGAAAATCTTCTGGGGGATGGATCCAATGCCTCAGCACTGTCACATATCCAAGCACCATACTATTCTGCATCTGGATAATTCGCTGGTCTCTGGCACTCTGCTATCGTTATCATCTATGATCTTTATAAGGTTTTTAAGAAGAAGTGAAGGAGTTGAAGCAGCTCGCAAATACTTTCTTGATGCACGGAAATCTCCAAATTGCACTTACCATGTCTATGTAGCTCACGCGATGATGGCTTTTTGTCTTGACAAGGATGCAAAGATGGCGCACAATGTTTTTGAAGCAGGGTTGAAACGCTTTATGCATGAGCCTGGATACATCCTTGAGTATGCAGATTTCCTTTATCGTTTGAATGACGATAGAAACATCAGAGCATTATTTGAACGTGCATTGAGCTCACTCCCCCCAGAGGAATCTGTTGAGGTTTGGAAAAAATTCACTCAATTTGAGCAAACGTATGGAGATCTTGCCAGCATGTTGAAGGTTGAGCAGAGAAGGAAAGAAGCTCTTTTCAGAACAGGTGATGATGGAACATCAGAGTTAGAGAGTTCGTTACAAGATGTTGTATCACGCTACAGTTTCATGGATCTGTGGCCTTGCTCTTCAAATGACTTGGATCATTTAGCACGCCAAGAGTGGCTCGCGAGGAACATCAACAAAAAAACTGACAAACCTACTCTTGGTATTGAGGCAGGTTCTGCAGATAAGATTTCTTCTGGTGTTTCGTCCAACACAAATCCCCTTGCCAAGGTTGTGTATCCAGATACTTCAAAAATGACAATTTATGACCCAAGGCAAATGTCAGGTCCTGCTGCTCTTGCAGTTCCATCCGCTTCAGGCACCTTGCCTTATTCTGGTACTCCATTTAGCAGTGGTGGACCACCTAATGCTCTTAATGATATTCTGAAATCGTTGCCCCCTGCATTTGCAGCGTTCATGACAAATTTGCCAGCTGTTGAAGGTCCTACTCCTGATGCTGATTTTGTGATATCCGTATGTTTGCAAAGCAACATTCCTTTAGCAACCGGAAAATCAGGAACCGCCTCTCTGCCGTTGCAGTCAGGCCCTGCTCCATGTACGAGTGACATCTCTGATTCAAGCAAATTCAGGTCGAGAGACAGACAGCCTGGAAAGAGGAAAGACATGGACAGGCAAGAGGATGATGAATCGTCGACTGTACAAAGCCAGCCCCTTCCTAGAGATGTTTTCAAGATTCGCCAATTACAGAAAACCCGTGTTGCTAGTTCGTCTCGAGTTACTAGTTCATACACTGGATCGGCGTCGTATGGCAGTGCTCTTTCTGGAGACCTCTCGGGCAGCACTGGTTGA
Protein:  
MTEKYNVEAAEILANEALRLPISEAVPIYEQLLSTFPTAAKYWKQYVEAHMTVNNDDATKQIFSRCLLNCLQIPLWRCYIRFIRKVNDKRGNEGQEETRKAFDFMLNYVGADIASGPVWMEYIAFLRSSPAQTTQEESQRMTSVRKAYQRAIVTPTHHVEQLWRDYENFENSISRALAKGLVSEYQPKYNSARAVYRERKKYIDEIDWNMLAIPPSGTSKEEMQWMAWKRLLAFEKANPQRIDSASANKRIVFTYEQCLMHLYHYPDIWYEYATWHAKAGSIDSAIKVFQRALKALPDMVMLNLRNHVEPFRLLKKYMKIFWGMDPMPQHCHISKHHTILHLDNSLVSGTLLSLSSMIFIRFLRRSEGVEAARKYFLDARKSPNCTYHVYVAHAMMAFCLDKDAKMAHNVFEAGLKRFMHEPGYILEYADFLYRLNDDRNIRALFERALSSLPPEESVEVWKKFTQFEQTYGDLASMLKVEQRRKEALFRTGDDGTSELESSLQDVVSRYSFMDLWPCSSNDLDHLARQEWLARNINKKTDKPTLGIEAGSADKISSGVSSNTNPLAKVVYPDTSKMTIYDPRQMSGPAALAVPSASGTLPYSGTPFSSGGPPNALNDILKSLPPAFAAFMTNLPAVEGPTPDADFVISVCLQSNIPLATGKSGTASLPLQSGPAPCTSDISDSSKFRSRDRQPGKRKDMDRQEDDESSTVQSQPLPRDVFKIRQLQKTRVASSSRVTSSYTGSASYGSALSGDLSGSTG